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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903755.1_cds_XP_016453894.1_47975
CDS Infomation

[gene=LOC107778195] [db_xref=GeneID:107778195] [protein=LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 64] [transl_except=(pos:694..696,aa:Other)] [protein_id=XP_016453894.1] [location=complement(join(79020..79148,79389..79519,79935..80028,81187..81472,81575..82068,82475..82544,83263..83379,83466..83595,84517..84790,84933..85007))] [gbkey=CDS]
Sequence

ATGGCTCCTCTCAAAATTCTCCTCTGTGGTGACGTACTCGGCCGTCTCAATCAGCTATTC
AAGCGCGTTTCTTCGGTGAACAAATCAGCTGGTCCATTTGATGCTCTATTCTGCGTGGGC
CAATTTTTCCCGGATTCAATTGAAGGGCTTGAGGAATTCAATGGATACATTGAAGGCCGC
TCCAGTGTTCCTATACCGACCTATTTCATCGGGGACTATGGCGTCGGGTCCCCGAAAATA
TTGTCAGAAGTATTAAAGGACCCGAATAATCAAGGGTTTAAGATGGAGGGTTTTAGGGTA
TGTGAGAATTTGTTTTGGTTGAAAAGCAGTGGAAAATTTGAGCTTCATGGGTTATCTGTG
GCATACTTATCTGGTAGGCGATCTCCAACTGGAGCTCAGTTTGGAACATACAGTCAAGAC
GATGTTGATGCTTTGAGGGCTTTAGCGGAGGATCCGGGAACAGTTGACATATTTCTTACT
AATGAATGGCCCAGTGGAGTCACGAATGGAGTGACATCAAATATTCCTTCAGAAATTTCT
GATTCATCTGATAGTGATCCCACAGTGTCAGAATTAGTAGCTGAGATTAAGCCTCGGTAT
CATGTTGCAGGAACTATGGGTGTANCTCTCTCTCTCTCTCTCTCTCTCTCATTCCTTTGC
AACACAGTCTACCTCATCCCTTTTGTATCATTTTGAATCCTCATTTTATGCATGAATACT
TTGCAGAAATTTATTCATGCAATATCCCCCACTCCGGCATCAACAATGTCGAAACCTGAG
CTTAGGGCAAAGCCACCAAACACTACTTTATCTCCATATACCAATGTTGACAAAGCAGTC
CCACCCGATGGAGCAACGAAGAGGCCCGGTGATAGTACGTCTGAGTCACAGTATTGGAGA
TATGATGTATCTCAGAAAAGGCAGAAACATGGAGATGGTAATGGTGACAGACTCTGCTTT
AAATTCGTCTCTTCTGGCTCTTGTCCAAGAGAGAAGTGCCACTTTAGGCATGATGAAGAA
GCTATGCAGCAGTACTCAAGAGGTGTGTGTTTTGACTTTCTCAACAAGGGAAAATGTGAA
AGAGGTCCCAATTGCAACTTCAAGCATAGTTTGCAGGAAGAAGGTGGCAGATCAGCTACT
GGTGCAGCAAGCTCTCACAGGTCAAGAGAATGTTGGTTTTGTTTGTCAAGTCCGAATGTT
GAGTCACATCTCATCACTAGTGTTGGAGAATATTACTACTGTGCACTTGCTAAAGGACCT
TTATTACCAGATCATGCGCTGATTATGCCCATTGAACATATGCCCAATACGTTATCTCTT
TCACAAGAATGTGAAAAGGAATTGGAACATCTTCAAAACAGCTTCAGAGCTTACTTCAAA
AGGCAAGGGAAGGAAGCAATTTTTTTCGAGTGGGCATTTAAACGAGGAATTCATGCCAAT
CTTCAGGTTGTTCCTATTCCCTCGTCCAGGGCATCTTTGGTTCAAGATATTTTTAACTTG
GCTGCTGAAAAATTGGGATTCAAATTTACCATAATTAAGGAAGGAAGACAAGCGTTGCGG
ACCCAGTTTGACAGAAGTTGCAGCTTATTTTATGTTGAAGTTCCTGGAGGTGGTATTTTG
TCACATGTTGTGGAGGAGAATGAGAAATTCCCAGTTCAATTTGGTCGTGAGGTTTTGGCA
GGCTTGCTAAATGTGGCAGATAGAGCTGATTGGAGAAATTGTAAGGATAGCAAAGAAGAA
GAAATTAAAATGGTCGAGAGATTCAAGAGTGGATTTCAAGAATATGATCCAAATCAATAG

Peptide Sequence

PEP ID

XP_016453894.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 64 [Nicotiana tabacum]
Sequence

MAPLKILLCGDVLGRLNQLFKRVSSVNKSAGPFDALFCVGQFFPDSIEGLEEFNGYIEGR
SSVPIPTYFIGDYGVGSPKILSEVLKDPNNQGFKMEGFRVCENLFWLKSSGKFELHGLSV
AYLSGRRSPTGAQFGTYSQDDVDALRALAEDPGTVDIFLTNEWPSGVTNGVTSNIPSEIS
DSSDSDPTVSELVAEIKPRYHVAGTMGVXLSLSLSLSFLCNTVYLIPFVSFXILILCMNT
LQKFIHAISPTPASTMSKPELRAKPPNTTLSPYTNVDKAVPPDGATKRPGDSTSESQYWR
YDVSQKRQKHGDGNGDRLCFKFVSSGSCPREKCHFRHDEEAMQQYSRGVCFDFLNKGKCE
RGPNCNFKHSLQEEGGRSATGAASSHRSRECWFCLSSPNVESHLITSVGEYYYCALAKGP
LLPDHALIMPIEHMPNTLSLSQECEKELEHLQNSFRAYFKRQGKEAIFFEWAFKRGIHAN
LQVVPIPSSRASLVQDIFNLAAEKLGFKFTIIKEGRQALRTQFDRSCSLFYVEVPGGGIL
SHVVEENEKFPVQFGREVLAGLLNVADRADWRNCKDSKEEEIKMVERFKSGFQEYDPNQ

Transcript Sequence

Gene sequence data has not been registered.